From 003ddf66da8d510ae08c4d123395c71692d81b18 Mon Sep 17 00:00:00 2001
From: dave <dave@dtu.dk>
Date: Wed, 3 Aug 2016 09:05:26 +0200
Subject: [PATCH] prepost.Simulation: find+args mode: cp instead of ln for turb
---
wetb/prepost/Simulations.py | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/wetb/prepost/Simulations.py b/wetb/prepost/Simulations.py
index 21ff29c5..56c96bbd 100755
--- a/wetb/prepost/Simulations.py
+++ b/wetb/prepost/Simulations.py
@@ -1207,10 +1207,10 @@ def create_chunks_htc_pbs(cases, sort_by_values=['[Windspeed]'], ppn=20,
pbs += 'cd %s\n' % pbase
pbs += "echo 'current working directory:'\n"
pbs += 'pwd\n'
- pbs += 'echo "hard-linking all turb files into CPU dirs"\n'
+ pbs += 'echo "copy all turb files into CPU dirs"\n'
for k in range(ppn):
rpl = (os.path.relpath(os.path.join(sim_id, turb_dir_base)), k)
- pbs += 'find %s -iname *.bin -exec ln {} %s/{} \\;\n' % rpl
+ pbs += 'find %s -iname *.bin -exec cp {} %s/{} \\;\n' % rpl
# =====================================================================
# finally we can run find+xargs!!!
@@ -1240,6 +1240,8 @@ def create_chunks_htc_pbs(cases, sort_by_values=['[Windspeed]'], ppn=20,
# move results back from the node sim_id dir to the origin
pbs += '\n'
pbs += '\necho "%s"\n' % ('-'*70)
+ pbs += "echo 'total scratch disk usage:'\n"
+ pbs += 'du -hs %s\n' % pbase
pbs += 'cd %s\n' % os.path.join(pbase, sim_id)
pbs += "echo 'current working directory:'\n"
pbs += 'pwd\n'
--
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