From 05e952af5c660b64dd244e4b001766e5ab2c0ef6 Mon Sep 17 00:00:00 2001
From: David Robert Verelst <dave@dtu.dk>
Date: Thu, 6 Apr 2017 10:19:19 +0200
Subject: [PATCH] dirty fix [tu_seed]/[seed] tags, need solution for issue #37
urgently
---
docs/howto-make-dlcs.md | 2 +-
wetb/prepost/Simulations.py | 13 +++++++------
wetb/prepost/dlcdefs.py | 17 ++++++++++++++---
wetb/prepost/dlctemplate.py | 2 +-
.../demo_dlc/ref/htc/DLCs/dlc01_demos.xlsx | Bin 6766 -> 7368 bytes
.../data/demo_dlc/ref/prepost/remote.pkl | Bin 4634 -> 6042 bytes
.../data/demo_dlc/ref/prepost/remote_tags.txt | 4 ++++
.../data/demo_dlc/source/demo_dlc_remote.zip | Bin 9512 -> 9512 bytes
8 files changed, 27 insertions(+), 11 deletions(-)
diff --git a/docs/howto-make-dlcs.md b/docs/howto-make-dlcs.md
index e9623a4..9e2db0e 100644
--- a/docs/howto-make-dlcs.md
+++ b/docs/howto-make-dlcs.md
@@ -454,7 +454,7 @@ tags:
* ```[MannAlfaEpsilon]```
* ```[MannL]```
* ```[MannGamma]```
-* ```[tu_seed]```
+* ```[seed]```
* ```[turb_nr_u]``` : number of grid points in the u direction
* ```[turb_nr_v]``` : number of grid points in the v direction
* ```[turb_nr_w]``` : number of grid points in the w direction
diff --git a/wetb/prepost/Simulations.py b/wetb/prepost/Simulations.py
index a7edd8a..ad22964 100755
--- a/wetb/prepost/Simulations.py
+++ b/wetb/prepost/Simulations.py
@@ -4003,7 +4003,7 @@ class Cases(object):
return stats_df, Leq_df, AEP_df
def statistics(self, new_sim_id=False, silent=False, ch_sel=None,
- tags=['[turb_seed]','[windspeed]'], calc_mech_power=False,
+ tags=['[seed]','[windspeed]'], calc_mech_power=False,
save=True, m=[3, 4, 6, 8, 10, 12], neq=None, no_bins=46,
ch_fatigue={}, update=False, add_sensor=None,
chs_resultant=[], i0=0, i1=None, saveinterval=1000,
@@ -4020,7 +4020,7 @@ class Cases(object):
If defined, only add defined channels to the output data frame.
The list should contain valid channel names as defined in ch_dict.
- tags : list, default=['[turb_seed]','[windspeed]']
+ tags : list, default=['[seed]','[windspeed]']
Select which tag values from cases should be included in the
dataframes. This will help in selecting and identifying the
different cases.
@@ -4173,6 +4173,7 @@ class Cases(object):
template = "self.sig[:,self.res.ch_dict['{}']['chi']]"
for chan in channel_tags:
# first remove the [] from the tag
+ # FIXME: fails when the same channel occurs more than once
expr = expr.replace(chan, chan[1:-1])
expr = expr.replace(chan[1:-1], template.format(chan[1:-1]))
@@ -4912,7 +4913,7 @@ class Cases(object):
return df_AEP
- def stats2dataframe(self, ch_sel=None, tags=['[turb_seed]','[windspeed]']):
+ def stats2dataframe(self, ch_sel=None, tags=['[seed]','[windspeed]']):
"""
Convert the archaic statistics dictionary of a group of cases to
a more convienent pandas dataframe format.
@@ -4930,7 +4931,7 @@ class Cases(object):
defined, only those channels are considered.
ch_sel[short name] = full ch_dict identifier
- tags : list, default=['[turb_seed]','[windspeed]']
+ tags : list, default=['[seed]','[windspeed]']
Select which tag values from cases should be included in the
dataframes. This will help in selecting and identifying the
different cases.
@@ -5377,7 +5378,7 @@ class MannTurb64(prepost.PBSScript):
* [MannAlfaEpsilon]
* [MannL]
* [MannGamma]
- * [tu_seed]
+ * [seed]
* [turb_nr_u]
* [turb_nr_v]
* [turb_nr_w]
@@ -5454,7 +5455,7 @@ class MannTurb64(prepost.PBSScript):
rpl = (float(case['[MannAlfaEpsilon]']),
float(case['[MannL]']),
float(case['[MannGamma]']),
- int(case['[tu_seed]']),
+ int(case['[seed]']),
int(case['[turb_nr_u]']),
int(case['[turb_nr_v]']),
int(case['[turb_nr_w]']),
diff --git a/wetb/prepost/dlcdefs.py b/wetb/prepost/dlcdefs.py
index a8d8b12..e1a8b99 100644
--- a/wetb/prepost/dlcdefs.py
+++ b/wetb/prepost/dlcdefs.py
@@ -27,7 +27,7 @@ def casedict2xlsx():
"""
-def configure_dirs(verbose=False):
+def configure_dirs(verbose=False, pattern_master='*_master_*'):
"""
Automatically configure required directories to launch simulations
"""
@@ -40,7 +40,7 @@ def configure_dirs(verbose=False):
PROJECT = P_RUN.split(os.sep)[-2]
sim_id = P_RUN.split(os.sep)[-1]
- master = find_master_file(P_SOURCE)
+ master = find_master_file(P_SOURCE, pattern=pattern_master)
if master is None:
raise ValueError('Could not find master file in htc/_master')
MASTERFILE = master
@@ -169,7 +169,7 @@ def tags_dlcs(master):
master.tags['[Windspeed]'] = 8
master.tags['[wdir]'] = 0 # used for the user defined wind
master.tags['[wdir_rot]'] = 0 # used for the windfield rotations
- master.tags['[tu_seed]'] = 0
+ master.tags['[seed]'] = None
master.tags['[tu_model]'] = 0
master.tags['[TI]'] = 0
master.tags['[Turb base name]'] = 'none'
@@ -363,10 +363,21 @@ def excel_stabcon(proot, fext='xlsx', pignore=None, pinclude=None, sheet=0,
elif tags_dict[str(key)].lower() == 'nan':
tags_dict[str(key)] = True
+ # FIXME: this horrible mess requires a nice and clearly defined
+ # tag spec/naming convention, and with special tag prefix
if '[Windspeed]' not in tags_dict and '[wsp]' in tags_dict:
tags_dict['[Windspeed]'] = tags_dict['[wsp]']
+ # avoid that any possible default tags from wetb will be used
+ # instead of the ones from the spreadsheet
if '[seed]' in tags_dict:
tags_dict['[tu_seed]'] = tags_dict['[seed]']
+ # in case people are using other turbulence tag names in the sheet
+ elif '[tu_seed]' in tags_dict:
+ tags_dict['[seed]'] = tags_dict['[tu_seed]']
+ elif '[turb_seed]' in tags_dict:
+ tags_dict['[seed]'] = tags_dict['[turb_seed]']
+ else:
+ raise KeyError('[seed] should be used as tag for turb. seed')
tags_dict['[Case folder]'] = tags_dict['[Case folder]'].lower()
tags_dict['[Case id.]'] = tags_dict['[Case id.]'].lower()
diff --git a/wetb/prepost/dlctemplate.py b/wetb/prepost/dlctemplate.py
index c7827ed..e056518 100644
--- a/wetb/prepost/dlctemplate.py
+++ b/wetb/prepost/dlctemplate.py
@@ -127,7 +127,7 @@ def master_tags(sim_id, runmethod='local', silent=False, verbose=False):
master.tags['[MannAlfaEpsilon]'] = 1.0
master.tags['[MannL]'] = 29.4
master.tags['[MannGamma]'] = 3.0
- master.tags['[tu_seed]'] = 0
+ master.tags['[seed]'] = None
master.tags['[turb_nr_u]'] = 8192
master.tags['[turb_nr_v]'] = 32
master.tags['[turb_nr_w]'] = 32
diff --git a/wetb/prepost/tests/data/demo_dlc/ref/htc/DLCs/dlc01_demos.xlsx b/wetb/prepost/tests/data/demo_dlc/ref/htc/DLCs/dlc01_demos.xlsx
index 2725ebf94c486118c288c7b1bf73bfba9fb79afd..6b4bb2d9fe4f7b5b2e347ecb8da55e2cd3695669 100755
GIT binary patch
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diff --git a/wetb/prepost/tests/data/demo_dlc/ref/prepost/remote.pkl b/wetb/prepost/tests/data/demo_dlc/ref/prepost/remote.pkl
index 424870abe4d235d40b0bc86884127247ace71cde..76f3458974d302669780c4e764e56dec5a7d545b 100644
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diff --git a/wetb/prepost/tests/data/demo_dlc/ref/prepost/remote_tags.txt b/wetb/prepost/tests/data/demo_dlc/ref/prepost/remote_tags.txt
index eebe622..c9bef2a 100644
--- a/wetb/prepost/tests/data/demo_dlc/ref/prepost/remote_tags.txt
+++ b/wetb/prepost/tests/data/demo_dlc/ref/prepost/remote_tags.txt
@@ -50,6 +50,7 @@
[pbs_in_dir] : pbs_in/dlc01_demos/
[pbs_out_dir] : pbs_out/dlc01_demos/
[res_dir] : res/dlc01_demos/
+ [seed] : 0
[shear_exp] : 0
[staircase] : False
[t flap on] : -1
@@ -106,6 +107,7 @@
[pbs_in_dir] : pbs_in/dlc01_demos/
[pbs_out_dir] : pbs_out/dlc01_demos/
[res_dir] : res/dlc01_demos/
+ [seed] : 0
[shear_exp] : 0
[staircase] : False
[t flap on] : -1
@@ -162,6 +164,7 @@
[pbs_in_dir] : pbs_in/dlc01_demos/
[pbs_out_dir] : pbs_out/dlc01_demos/
[res_dir] : res/dlc01_demos/
+ [seed] : 100
[shear_exp] : 0
[staircase] : False
[t flap on] : -1
@@ -218,6 +221,7 @@
[pbs_in_dir] : pbs_in/dlc01_demos/
[pbs_out_dir] : pbs_out/dlc01_demos/
[res_dir] : res/dlc01_demos/
+ [seed] : 100
[shear_exp] : 0
[staircase] : False
[t flap on] : -1
diff --git a/wetb/prepost/tests/data/demo_dlc/source/demo_dlc_remote.zip b/wetb/prepost/tests/data/demo_dlc/source/demo_dlc_remote.zip
index 3c02a1d7a11acaeff10fdae72416c4856fcbc4bc..653dd7fa920d3d0154225072507087b8fbf3cfa0 100644
GIT binary patch
delta 179
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--
GitLab