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WindEnergyToolbox
Merge requests
!85
Removed pathlib dependency from PBSMultiRunner
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Merged
Removed pathlib dependency from PBSMultiRunner
remove_pathlib_from_multirunner
into
master
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0
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1
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1
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2
Merged
Mads M. Pedersen
requested to merge
remove_pathlib_from_multirunner
into
master
6 years ago
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0
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1
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2
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master
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and
latest version
latest version
a6a51d81
1 commit,
6 years ago
2 files
+
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10
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wetb/utils/cluster_tools/pbsfile.py
+
4
−
5
Options
@@ -137,7 +137,6 @@ class PBSMultiRunner(PBSFile):
import
os
import
glob
import
numpy
as
np
from
pathlib
import
Path
import
re
# find available nodes
@@ -150,7 +149,8 @@ class PBSMultiRunner(PBSFile):
def
get_info
(
f
):
try
:
return
(
f
,)
+
pat
.
match
(
Path
(
f
).
read_text
()).
groups
()
with
open
(
f
)
as
fid
:
return
(
f
,)
+
pat
.
match
(
fid
.
read
()).
groups
()
except
Exception
:
return
(
f
,
f
.
replace
(
'
.in
'
,
'
.out
'
),
'
00:30:00
'
)
pbs_info_lst
=
map
(
get_info
,
pbs_files
)
@@ -164,12 +164,11 @@ class PBSMultiRunner(PBSFile):
def
start_jobs
(
self
):
import
os
from
pathlib
import
Path
import
multiprocessing
import
platform
import
time
pbs_info_lst
=
eval
(
Path
(
'
pbs.dict
'
).
read_text
())[
platform
.
node
()]
with
open
(
'
pbs.dict
'
)
as
fid
:
pbs_info_lst
=
eval
(
fid
.
read
())[
platform
.
node
()]
arg_lst
=
[
'
echo starting %s && mkdir -p %s && env PBS_JOBID=$PBS_JOBID %s &> %s && echo finished %s
'
%
(
f
,
os
.
path
.
dirname
(
o
),
f
,
o
,
f
)
for
f
,
o
,
_
in
pbs_info_lst
]
print
(
arg_lst
[
0
])
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